GBLUP and rrBLUP estimation — GBLUPs • MrBean

GBLUP and rrBLUP estimation

GBLUPs(
  pheno_data = NULL,
  geno_matrix = NULL,
  genotype = NULL,
  traits = NULL,
  method = c("GBLUP", "rrBLUP", "mix")
)

Arguments

pheno_data: data.frame with phenotypic data
geno_matrix: data.frame with first column identifying the genotype names and the rest containing marker information in format (-1, 0 , 1).
genotype: string with the genotype name
traits: vector with the traits to be analyzed
method: "GBLUP", "rrBLUP" or "mix" ("mix" in progress)

Value

List with GBLUPs, variance components and marker effects. list(results, var_comp, markers)

Examples

# GBLUPs(
# pheno_data = NULL,
# geno_matrix = NULL,
# genoype = NULL,
# traits = NULL,
# method = c("GBLUP", "rrBLUP")
# )